CDS
| Accession Number | TCMCG041C09691 |
| gbkey | CDS |
| Protein Id | XP_010254678.1 |
| Location | complement(join(2357573..2358264,2359583..2359712,2359806..2359974,2362487..2362557,2362652..2362865,2362947..2363457,2366899..2367013,2367165..2367219,2367328..2367410,2367498..2367548,2369316..2369455,2370447..2370580,2385627..2385693,2385796..2385888,2403360..2403490,2405033..2405069,2406060..2406120,2406239..2406358)) |
| Gene | LOC104595591 |
| GeneID | 104595591 |
| Organism | Nelumbo nucifera |
Protein
| Length | 957aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA264089 |
| db_source | XM_010256376.2 |
| Definition | PREDICTED: RNA-binding protein 28 isoform X2 [Nelumbo nucifera] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA-binding protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14573
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGGAAGAAGAAAAGGATGCAGGAGAGTGGTGAAGGGCTCAAGCCGAAAGAGGATAGCGGTCATTCCCCATCAACGATATTCGTCAGCAACCTGCCCTATTCGTTCACTAACTCGCAGTTGGAAGAAACATTTAGCGAGGTTGGTCCAATAAGACGCTGCTTCATGGTGACAGAAAAGGGATCGAATGCACACCGTGGATTTGGATTTGTCCAATTTGCTGTCATGGAAGATGCTAACCGTGCTATCGAGCTCAAAAATGGTGCATCTATTGGTGGTAGGAAAGTTGTGGTTAAACATGCCATGCATCGTCTTCCCCTAGAGCAGCGCCATTCAAGGGCAAATCAAGTTCATATGAATGATGTCAAGAAAAAGGATGGCGATGAGAATTTCTCCTCCAGGATGGTCAAAAAGGAACACGCTTCAAAGCTGCACACAAAAGGAACCACAGAAGAAATGGTAGTTCTCAGCGATCATGCCTATAAAACTGATGGTTCAGAAAAGCAGAGGGTTGCTAGGACGGTCATATTTGGTGGACTTCTTAGTGTTGACATGGCTGAGGAAGTTCACCGTCGCACCAGAGAGGTTGGCACTGTATGTTCTATAAGCTATCCTCTTCCAAAAGAAGAGCTTGAACTACATGGACTGGCTAAGGATGGATGCAAGATGAATGCATCATCTGTACTTTATGCTAGTGTTAAAGCAGCACGTGCTTCTGTTGCTATGTTGCATCAGCAGGAGATAAAGGGTGGATGTGTATGGGCACGCCAGTTGGGTGGGGAGGGTTCCAAGACTCGGAAATGGAGACTTATAGTTAGGAACCTTCCTTTTAAGGCAAAAGTCAATGAGATAAAAGATTTATTTGCATCAGCAGGTTTTGTGTGGGATGTCTTTGTTCCACTAAATTCTAAGACAGGGCTATCTAAGGGATTTGCATTTGTCTCATTCACGTGTAAGCAGGATGCAGAAAACGCTATCAAGAAAGTAAATGGGCAAATGATCAGTAAAAGACCAATTGCTGTTGATTGGGCTGTTCCAAAGAAAATATATACAACTGGTGGTAATTTGGTTGAGACTCAGACAGATGGGGCAGAGAATGATAGACATGATGAGAGTGACAACAGTAGCATTGATATGGAAGGTGATTATGCTGGGAGTGATAAGGATTCCCAACAGGTTGATGCAGAAGAAGTCCAAGAAGGTTCTGATCACATAGACAATGAAGTTCATTCTAAAGAACTGGATTTTGATGAGGAGGCAGGCATTGTAAAGAAAGTTCTTAATAATTTGATCACATCTTCTGCCAGTGCAACTCTGCCATTTGGTGGAAATTCCAGGTTACCACAAGGTAATGAGACTGCTATTGATGCTAAGAACAAGTTATCCATTCAAGAAAAGAGTTTGGATGTAGCTTTACCTCCGAAATCTAGCAAAGTTGAGACAGTAGCTCTTGGGCGAGTTGATAGTGAGGATGATTTACAGAGAACAATTTTTATAAGCAACCTCCCATTTGATGTTGATATTGAAGATGTGAAGAAACGGTTCTCTGCATTTGGGGAAGTGAAGTCCTTTGTCCCCGTTCTTCATCAAGTCACCAAGCGACCAAGAGGCACAGGATTTCTTAGGTTTAATACAACATCTGCTGCTGAAGCCGCAGTTTTAGCAGCAAATGCTACATCTGGGTTAGGGATTGTTCTAAATGGCAGACAGCTTACTGTTTTGAAGGCTTTGGACAAGAAATCAGCTCATAAAAAGGAATTAGAGAAGACAAAGAATGAGGATCATGATCATCGCAACCTTTATCTTGCCAAGGAAGGTCTTATTCTTGAAGGGACATCAGCTGCAGAAGGTGTTTCAGCGAGTGACATGCTAAAACGTCAAATGTTGTACAAGAAAAAAATGTCCAAACTAGAATCTCCCAATTTTCATGTTTCAAGGACTAGACTTATTGTATACAATTTGCCAAAGTCTATGACAGAGAAGGAACTTAAAAAGCTCTTTATAGATGCAGTTCTTTCCCGGGCATCCAAACAAAAGCCTGTGATTCGACAGATAAAGTTCTTGGAGGATTCAAAGAAAGGCAAGGTGGTTTCAAAGAACTATTCACGAGGGGTGGCTTTTGTTGAGTTTACTGAACATCAACATGCAATAGTGGCTCTAAGAGTTCTTAATAACAATCCTGAAACTTTTGGTCCTGAGCATCGCCCCATTGTGGAATTTGCTCTTGATAATATCCAAACATTGAAGAAGCGGAATGCTAAGCTACAGGCTCAGCAGCAGAGTGCAGGTTCTCATCTGGAAGATGTTCATCCAAAGACTGCGTTACAACAGAAAGATACTAGGAAGAAGTTAGGAAAAAGCAAAACTAGAGTTGATGACATACCATCTGAGGTAATAACCAGTAAAGACCATGAAGTGGATAGGGTCCAGAAAACAGGCAACAAAGAAGGATCAGCGGCAAAAAAGCACAAGGGAATTCCAGAAAGTGGGAGAAAAGGTGGGTTGACATCTGAGGAGTCAACTAGGAAGCCGAGCAGGCACCAGAAAATGACCAAACAGAAGGGTGGAAAATTATTTCATGGTGGAGATATGGTTGTTGGTACTGAAGACGAAAAGAAAGCAAAAGTAGAGATAGGTCCAAAGAAGAGGAAGCTACAGGATAGTGTTCATTCAGAAGAAATGATGGATAGGAAAAGCCTGAAGAAGAAAAAGAAAAAGAGCAAGAAATCAGAAGCATCGGATAAAGAACTAGTTGATAAACTTGACATGTTGATCGAACAGTATCGTTCAAAGTTTTCAAAGAGAAGCTCTTCAGACATGATTGGTGGTGAAAAACAAGGCTCAAGGCAAATCAGAAGATGGTTCCAGTCGTAG |
| Protein: MGKKKRMQESGEGLKPKEDSGHSPSTIFVSNLPYSFTNSQLEETFSEVGPIRRCFMVTEKGSNAHRGFGFVQFAVMEDANRAIELKNGASIGGRKVVVKHAMHRLPLEQRHSRANQVHMNDVKKKDGDENFSSRMVKKEHASKLHTKGTTEEMVVLSDHAYKTDGSEKQRVARTVIFGGLLSVDMAEEVHRRTREVGTVCSISYPLPKEELELHGLAKDGCKMNASSVLYASVKAARASVAMLHQQEIKGGCVWARQLGGEGSKTRKWRLIVRNLPFKAKVNEIKDLFASAGFVWDVFVPLNSKTGLSKGFAFVSFTCKQDAENAIKKVNGQMISKRPIAVDWAVPKKIYTTGGNLVETQTDGAENDRHDESDNSSIDMEGDYAGSDKDSQQVDAEEVQEGSDHIDNEVHSKELDFDEEAGIVKKVLNNLITSSASATLPFGGNSRLPQGNETAIDAKNKLSIQEKSLDVALPPKSSKVETVALGRVDSEDDLQRTIFISNLPFDVDIEDVKKRFSAFGEVKSFVPVLHQVTKRPRGTGFLRFNTTSAAEAAVLAANATSGLGIVLNGRQLTVLKALDKKSAHKKELEKTKNEDHDHRNLYLAKEGLILEGTSAAEGVSASDMLKRQMLYKKKMSKLESPNFHVSRTRLIVYNLPKSMTEKELKKLFIDAVLSRASKQKPVIRQIKFLEDSKKGKVVSKNYSRGVAFVEFTEHQHAIVALRVLNNNPETFGPEHRPIVEFALDNIQTLKKRNAKLQAQQQSAGSHLEDVHPKTALQQKDTRKKLGKSKTRVDDIPSEVITSKDHEVDRVQKTGNKEGSAAKKHKGIPESGRKGGLTSEESTRKPSRHQKMTKQKGGKLFHGGDMVVGTEDEKKAKVEIGPKKRKLQDSVHSEEMMDRKSLKKKKKKSKKSEASDKELVDKLDMLIEQYRSKFSKRSSSDMIGGEKQGSRQIRRWFQS |